Research Interests
My research asks how ecological and evolutionary processes interact to generate and maintain biodiversity. I use methods spanning evolutionary genomics, experimental ecology, metagenomics and biogeography to investigate how species and ecosystems form and respond to environmental change. My background is in plant research, but I also work on fungal and animal systems (e.g. mycorrhizal fungi, amphibians, fish, birds, reptiles) and am interested in any system suited to answering fundamental questions in ecology and evolution. I also develop new computational methods, including software for hypothesis testing in spatial ecology and bioinformatics.
I am currently a post-doc in Amy Ellison's group, investigating the microbial-immune dynamics of amphibian disease.
Publications
2024
- PublishedAccounting for extinction dynamics unifies the geological and biological histories of Indo-Australian Archipelago
Herrera-Alsina, L., Lancaster, L. T., Algar, A. C., Bocedi, G., Papadopulos, A. S. T., Gubry-Rangin, C., Osborne, O. G., Mynard, P., Creer, S., Villegas-Patraca, R., Made Sudiana, I., Fahri, F., Lupiyaningdyah, P., Nangoy, M., Iskandar, D. T., Juliandi, B., Burslem, D. F. R. P. & Travis, J. M. J., 30 Sept 2024, In: Proceedings of the Royal Society B: Biological Sciences. 291, 2031, p. 20240966
Research output: Contribution to journal › Article › peer-review - PublishedPhylosymbiosis shapes skin bacterial communities and pathogen-protective function in Appalachian salamanders
Osborne, O., Jiménez, R., Byrne, A., Gratwicke, B., Ellison, A. & Muletz-Wolz, C., 11 Jun 2024, In: The ISME Journal. 18, 1
Research output: Contribution to journal › Article › peer-review
2023
- PublishedGenetic assimilation of ancestral plasticity during parallel adaptation to Zinc contamination in Silene uniflora
Wood, D., Holmberg, J., Osborne, O., Helmstetter, A. J., Dunning, L. T., Ellison, A., Smith, R. J., Lighten, J. & Papadopulos, A. S. T., Mar 2023, In: Nature Ecology and Evolution. 7, 3, p. 414-423 10 p.
Research output: Contribution to journal › Article › peer-review - PublishedImpact of Phylogenetic Tree Completeness and Misspecification of Sampling Fractions on Trait Dependent Diversification Models
Mynard, P., Algar, A., Lancaster, L. T., Bocedi, G., Fahri, F., Gubry-Rangin, C., Lupiyaningdyah, P., Nangoy, M., Osborne, O., Papadopulos, A. S. T., Sudiana, I. M., Juliandi, B., Travis, J. & Herrera-Alsina, L., 19 May 2023, In: Systematic Biology. 72, 1, p. 106-119 14 p.
Research output: Contribution to journal › Article › peer-review - PublishedMapping the root systems of individual trees in a natural community using genotyping-by-sequencing
Osborne, O., Dobreva, M. P., Papadopulos, A. S. T., de Moura, M. S. B., Brunello, A. T., de Queiroz, L. P., Pennington, R. T., Lloyd, J. & Savolainen, V., 1 May 2023, In: New Phytologist. 238, 3, p. 1305-1317 13 p.
Research output: Contribution to journal › Article › peer-review
2022
- PublishedClimatic similarity and genomic background shape the extent of parallel adaptation in Timema stick insects
Chaturvedi, S., Gompert, Z., Feder, J., Osborne, O., Muschick, M., Riesch, R., Soria-Carrasco, V. & Nosil, P., Dec 2022, In: Nature Ecology and Evolution. 6, 12, p. 1952-1964 13 p.
Research output: Contribution to journal › Article › peer-review - PublishedFauxcurrence: simulating multi-species occurrences for null models in species distribution modelling and biogeography
Osborne, O., Fell, H. G., Atkins, H., Tol, J. V., Phillips, D., Herrerra-Alsina, L., Mynard, P., Bocedi, G., Gubry-Rangin, C., Lancaster, L. T., Creer, S., Nangoy, M., Fahri, F., Lupiyaningdyah, P., Sudiana, I. M., Juliandi, B., Travis, J., Papadopulos, A. S. T. & Algar, A. C., Jul 2022, In: Ecography. 2022, 7, e05880.
Research output: Contribution to journal › Article › peer-review - PublishedSafeguarding Imperiled Biodiversity and Evolutionary Processes in the Wallacea Center of Endemism
Struebig, M., Aninta, S. G., Beger, M., Bani, A., Barus, H., Brace, S., Davies, Z., De Brauwer, M., Diele, K., Djakiman, C., Djamaluddin, R., Drinkwater, R., Drumbell, A., Evans, D., Fusi, M., Herrera-Alsina, L., Iksander, D. T., Jompa, J., Juliandi, B., Lancaster, L. T., Limmon, G., Lindawati , Lo, M. G. Y., Lupiyaningdyah , P., McCannon, M., Meijaard, E., Mitchell, S. L., Mumbunan, S., O'Connell, D., Osborne, O., Papadopulos, A. S. T., Rahajoe, J. S., Rosaria, Rossiter, S. J., Rugayah, Rustiami, H., Salzmann, U., Sheherazade, Sudiana, I. M., Sukara, E., Tasirin, J. S., Tjoa, A., Travis, J. M. J., Trethowan, L., Trianto, A., Utteridge, T., Voigt, M., Winarni, N., Zakaria, Z., Edwards, D. P., Frantz, L. & Supriatna, J., Nov 2022, In: BioScience. 72, 11, p. 1118-1130 13 p.
Research output: Contribution to journal › Article › peer-review - PublishedThe missing link in biogeographic reconstruction: Accounting for lineage extinction rewrites history
Herrera‐Alsina, L., Algar, A. C., Lancaster, L. T., Ornelas, J. F., Bocedi, G., Papadopulos, A. S. T., Gubry-Rangin, C., Osborne, O., Mynard, P., Sudiana, I. M., Lupiyaningdyah, P., Juliandi, B. & Travis, J., Nov 2022, In: Journal of Biogeography. 49, 11, p. 1941-1951 11 p.
Research output: Contribution to journal › Article › peer-review
2021
- PublishedA multispecies BCO2 beak color polymorphism in the Darwin’s finch radiation
Enbody, E., Sprehn, C. G., Abzhanov, A., Bi, H., Dobreva, M. P., Osborne, O., Rubin, C.-J., Grant, P., Grant, B. R. & Andersson, L., 22 Oct 2021, In: Current Biology. 31, 24, p. 5597-5604
Research output: Contribution to journal › Article › peer-review - PublishedAncient geological dynamics impact neutral biodiversity accumulation and are detectable in phylogenetic reconstructions
Herrera‐Alsina, L., Algar, A. C., Bocedi, G., Gubry‐Rangin, C., Lancaster, L., Mynard, P., Osborne, O., Papadopulos, A. S. T., Creer, S., Nangoy, M., Fahri, F., Lupiyaningdyah, P., Sudiana, I. M., Juliandi, B. & Travis, J. M. J., Aug 2021, In: Global Ecology and Biogeography. 30, 8, p. 1633-1642 10 p.
Research output: Contribution to journal › Article › peer-review - PublishedRapid Parallel Adaptation to Anthropogenic Heavy Metal Pollution
Papadopulos, A. S. T., Helmstetter, A. J., Osborne, O., Comeault, A., Wood, D., Straw, E. A., Mason, L., Fay, M. F., Parker, J., Dunning, L. T., Foote, A., Smith, R. J. & Lighten, J., Sept 2021, In: Molecular Biology and Evolution. 38, 9, p. 3724-3736 13 p.
Research output: Contribution to journal › Article › peer-review
2020
- PublishedAdvances in metabarcoding techniques bring us closer to reliable monitoring of the marine benthos
Steyaert, M., Priestley, V., Osborne, O., Herraiz, A., Arnold, R. & Savolainen, V., 1 Nov 2020, In: Journal of Applied Ecology. 57, 11, p. 2234–2245
Research output: Contribution to journal › Article › peer-review - PublishedStrong divergent selection at multiple loci in two closely related species of ragworts adapted to high and low elevations on Mount Etna
Wong, E. L. Y., Nevado, B., Osborne, O. G., Papadopulos, A. S. T., Bridle, J. R., Hiscock, S. J. & Filatov, D. A., Jan 2020, In: Molecular Ecology. 29, 2, p. 394-412 19 p.
Research output: Contribution to journal › Article › peer-review - PublishedSympatric speciation in mountain roses (Metrosideros) on an oceanic island
Osborne, O. G., Kafle, T., Brewer, T., Dobreva, M. P., Hutton, I. & Savolainen, V., 31 Aug 2020, In: Philosophical Transactions of The Royal Society B: Biological Sciences. 375, 1806, p. 20190542
Research output: Contribution to journal › Article › peer-review
2019
- PublishedAdaptive Evolution Is Common in Rapid Evolutionary Radiations
Nevado, B., Wong, E. L. Y., Osborne, O. G. & Filatov, D. A., 23 Sept 2019, In: Current Biology. 29, 18, p. 3081-3086.e5
Research output: Contribution to journal › Article › peer-review - PublishedEcological speciation in sympatric palms: 3. Genetic map reveals genomic islands underlying species divergence in Howea
Papadopulos, A. S. T., Igea, J., Dunning, L. T., Osborne, O., Quan, X., Pellicer, J., Turnbull, C., Hutton, I., Baker, W. J., Butlin, R. K. & Savolainen, V., Sept 2019, In: Evolution. 73, 9, p. 1986-1995 10 p.
Research output: Contribution to journal › Article › peer-review - PublishedHow predictable is genome evolution?
Coathup, M. J., Osborne, O. G. & Savolainen, V., 13 Sept 2019, In: Elife. 8
Research output: Contribution to journal › Article › peer-review - PublishedPhylotranscriptomic Insights into the Diversification of Endothermic Thunnus Tunas
Ciezarek, A. G., Osborne, O. G., Shipley, O. N., Brooks, E. J., Tracey, S. R., McAllister, J. D., Gardner, L. D., Sternberg, M. J. E., Block, B. & Savolainen, V., 1 Jan 2019, In: Molecular Biology and Evolution. 36, 1, p. 84-96 13 p.
Research output: Contribution to journal › Article › peer-review - PublishedSpeciation in Howea Palms Occurred in Sympatry, Was Preceded by Ancestral Admixture, and Was Associated with Edaphic and Phenological Adaptation
Osborne, O. G., Ciezarek, A., Wilson, T., Crayn, D., Hutton, I., Baker, W. J., Turnbull, C. G. N. & Savolainen, V., 1 Dec 2019, In: Molecular Biology and Evolution. 36, 12, p. 2682-2697 16 p.
Research output: Contribution to journal › Article › peer-review
2018
- PublishedArbuscular mycorrhizal fungi promote coexistence and niche divergence of sympatric palm species on a remote oceanic island
Osborne, O. G., De-Kayne, R., Bidartondo, M. I., Hutton, I., Baker, W. J., Turnbull, C. G. N. & Savolainen, V., 1 Feb 2018, In: New Phytologist. 217, 3, p. 1254-1266 13 p.
Research output: Contribution to journal › Article › peer-review
2016
- PublishedDemographic history of speciation in a Senecio altitudinal hybrid zone on Mt. Etna
Filatov, D. A., Osborne, O. G. & Papadopulos, A. S. T., Jun 2016, In: Molecular Ecology. 25, 11, p. 2467-81 15 p.
Research output: Contribution to journal › Article › peer-review - PublishedMaintenance of Species Boundaries Despite Ongoing Gene Flow in Ragworts
Osborne, O. G., Chapman, M. A., Nevado, B. & Filatov, D. A., 13 Apr 2016, In: Genome Biology and Evolution. 8, 4, p. 1038-47 10 p.
Research output: Contribution to journal › Article › peer-review
2013
- PublishedRapid speciation with gene flow following the formation of Mt. Etna
Osborne, O., Batstone, T., Hiscock, S. & Filatov, D., 1 Sept 2013, In: Genome Biology and Evolution. 5, 9, p. 1704-1715
Research output: Contribution to journal › Article › peer-review - PublishedRecent ecological selection on regulatory divergence is shaping clinal variation in senecio on Mount Etna
Muir, G., Osborne, O. G., Sarasa, J., Hiscock, S. J. & Filatov, D. A., 31 Oct 2013, In: Evolution. 67, 10, p. 3032-42 11 p.
Research output: Contribution to journal › Article › peer-review